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IDSGR_6891 TypeCDS
From8276404 nt length927
To8275478 aa length308
Gene pI7.37
Definitionputative transcriptional regulator M.W (Da)34033
Note AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3315 putative DNA-binding protein4285.0e-121
coelSCO4944 putative DNA-binding protein4215.0e-119
samSAM23877_4766 DNA-binding protein4321.0e-154
kanCP970_15855 XRE family transcriptional regulator4257.0e-152
scabSCAB34431 4131.0e-116
saceSACE_1844 transcriptional regulator, XRE family3071.0e-84
nfarnfa5020 putative DNA-binding protein1741.0e-44

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain21-10163.02.2e-17

HTH_31Helix-turn-helix51-9437.81.4e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
BAG23720.1 putative transcriptional regulator [Streptomyces griseus subsp. ... 15950.0e+00
EGE46537.1 helix-turn-helix domain protein [Streptomyces sp. ACT-1] >emb 15940.0e+00
SBV07591.1 Predicted transcriptional regulators [Streptomyces sp. MnatMP-M7... 15890.0e+00
WP_042497834.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 15800.0e+00
WP_032773940.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 15800.0e+00
WP_161183911.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15760.0e+00
WP_093685372.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 15740.0e+00
WP_219207052.1 helix-turn-helix domain-containing protein, partial [Strepto... 15290.0e+00
WP_215106555.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14840.0e+00
NDZ59710.1 helix-turn-helix transcriptional regulator [Streptomyces anulatus... 14690.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear