-- | --

IDSGR_958 TypeCDS
From1133924 nt length609
To1133316 aa length202
Gene pI5.88
Definitionputative transcriptional regulator M.W (Da)21618
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1644 putative regulatory protein2552.0e-69
coelSCO6770 putative DNA-binding protein2422.0e-65
samSAM23877_6420 DNA-binding protein2593.0e-89
kanCP970_04355 XRE family transcriptional regulator2743.0e-95
scabSCAB12891 putative regulatory protein2731.0e-74

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain16-7361.37.5e-17

Cupin_21Cupin domain114-18150.21.4e-13

HTH_31Helix-turn-helix19-7346.92e-12

HTH_191Helix-turn-helix domain18-7442.16.2e-11

HTH_261Cro/C1-type HTH DNA-binding domain18-7425.21.5e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003964844.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9701.1e-132
WP_215101525.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9641.1e-131
WP_205085223.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9543.9e-130
WP_030623236.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9474.0e-129
WP_073805264.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9456.8e-129
WP_097871130.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9457.5e-129
WP_097948355.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9457.9e-129
WP_089117358.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9449.9e-129
WP_032791374.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9441.4e-128
WP_075263226.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9422.0e-128

PSORT result

LocalizationCertaintyPSORT said
Not Clear