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IDSGR_964 TypeCDS
From1141761 nt length1386
To1140376 aa length461
GenehopC pI6.75
Definitionputative squalene/phytoene dehydrogenase M.W (Da)49002
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1652 squalene/phytoene dehydrogenase6001.0e-172
coelSCO6762 putative phytoene dehydrogenase6132.0e-176
samSAM23877_6412 Phytoene desaturase%2C pro-zeta-carotene producing6280.0e+00
kanCP970_04395 FAD-dependent oxidoreductase6640.0e+00
scabSCAB12971 squalene/phytoene dehydrogenase6085.0e-175
saceSACE_4329 squalene/phytoene dehydrogenase3611.0e-100

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Amino_oxidase1Flavin containing amine oxidoreductase17-445140.58.7e-41

NAD_binding_81NAD(P)-binding Rossmann-like domain12-6448.57.1e-13

FAD_oxidored1FAD dependent oxidoreductase11-5233.92e-08

FAD_binding_21FAD binding domain11-4430.22.2e-07

GIDA1Glucose inhibited division protein A11-3622.25.8e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012378207.1 MULTISPECIES: hydroxysqualene dehydroxylase HpnE [Streptomyc... 18340.0e+00
WP_161185125.1 hydroxysqualene dehydroxylase HpnE [Streptomyces sp. SID724]... 18310.0e+00
WP_003964850.1 MULTISPECIES: hydroxysqualene dehydroxylase HpnE [Streptomyc... 18290.0e+00
WP_093683024.1 MULTISPECIES: hydroxysqualene dehydroxylase HpnE [unclassifi... 18220.0e+00
WP_215101543.1 hydroxysqualene dehydroxylase HpnE [Streptomyces sp. McG3] >... 18050.0e+00
WP_214298553.1 hydroxysqualene dehydroxylase HpnE [Streptomyces sp. Tu10] >... 17970.0e+00
WP_219613150.1 hydroxysqualene dehydroxylase HpnE [Streptomyces anulatus] >... 17910.0e+00
WP_073805481.1 MULTISPECIES: hydroxysqualene dehydroxylase HpnE [unclassifi... 17880.0e+00
WP_103534620.1 hydroxysqualene dehydroxylase HpnE [Streptomyces sp. SM11] 17870.0e+00
WP_097967104.1 hydroxysqualene dehydroxylase HpnE [Streptomyces sp. or20] 17860.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear