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IDSGR_965 TypeCDS
From1142833 nt length954
To1141880 aa length317
GenehopD pI7.4
Definitionputative squalene/phytoene synthase M.W (Da)34612
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1653 squalene/phytoene synthase4785.0e-136
coelSCO6760 putative phytoene synthase5015.0e-143
samSAM23877_6411 Phytoene synthase5130.0e+00
kanCP970_04400 squalene synthase HpnD4962.0e-179
scabSCAB12991 squalene/phytoene synthase4848.0e-138
saceSACE_4330 putative squalene/phytoene synthase2931.0e-80

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SQS_PSY1Squalene/phytoene synthase29-288247.61.4e-73

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
BAG17794.1 putative squalene/phytoene synthase [Streptomyces griseus subsp.... 15510.0e+00
SBU91106.1 farnesyl-diphosphate farnesyltransferase [Streptomyces sp. MnatM... 15410.0e+00
EGE40454.1 squalene synthase HpnD [Streptomyces sp. ACT-1] 15380.0e+00
15280.0e+00
GHF49419.1 squalene synthase HpnD [Streptomyces griseus] 15270.0e+00
MYR12387.1 presqualene diphosphate synthase HpnD [Streptomyces sp. SID724] >... 15240.0e+00
GGY37938.1 squalene synthase HpnD [Streptomyces anulatus] 15200.0e+00
WP_181010826.1 presqualene diphosphate synthase HpnD [Streptomyces sp. SM13... 15190.0e+00
MYT77869.1 presqualene diphosphate synthase HpnD [Streptomyces sp. SID8364] 15180.0e+00
MYR48534.1 presqualene diphosphate synthase HpnD [Streptomyces sp. SID4928] 15150.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear