| Related Links |
| Third Party Streptomyces avermitilis DataBase
| Microbial Genome Database for Comparative Analysis -MBGD-
| NCBI -ENTREZ Genome-
| UniProt
| NITE
| Other Genome Projects of Streptomyces and related microorganisms
| Streptomyces coelicolor A3(2) at Sanger Centre
| Streptomyces griseus IFO13350 (streptomycin producer)
| Streptomyces ambofaciens (industrial microorganism) at Genoscope
| Streptomyces scabies at Sanger Centre
| Nocardia farcinia at NIID
| Rhodococcus sp. RHA1 at Genome Canada | other DB
| Frankia alni (symbiotic nitrogen-fixing actinobacterium) at Genoscope
| Saccharopolyspora erythraea at Univ. Cambridge
| Mycobacterium tuberculosis [Sanger Centre|TubercuList|TIGR]
| Gold Genomes OnLine Database
| Other information
| KEGG (Kyoto Encyclopedia of Genes Genomes)
| PubMed Abstract of S. avermitilis
| List of cytochrome P450
| Bacterial cytochrome P450 sequences
| DSMZ information of S. avermitilis
| Peptidase of S. avermitilis @Sanger
| IslandPath Analysis by the Brinkman Laboratory and Academic Computing Service at Simon Fraser University.
| Restriction & modification in S. avermitilis at NEB REBASE Genome
| CAZy - Carbohydrate-Active enZYmes
| DOLOP A Database of Bacterial Lipoproteins.
| Converted SBML files of S. avermitilis.
| Omake
| Get seq. from genome.
| clustalW 2.1 - multiple alignment
| clustal omega 1.2.4 - multiple alignment MPI
| muscle 3.8.31 - multiple alignment
| mafft 7.429 - multiple alignment
| HmmerPfam v.3 search | PKS/NRPS domain finder | Bacterial Terpene Synthase finder
| Pfam for Genome | Dbase
| rpsblast - RSP-BLAST (Reversed Position Specific BLAST)
| deltablast - Delta-BLAST (Domain Enhanced Lookup Time Accelerated BLAST)
| ScanProsite - Prosite scanning -
| sequence converter | Seqkit interface
| sgRNA designer
| primer3 - primer design
| Secreted proteins predicted
| SignalP signal peptide prediction (Sec-pathway)
| TatP signal peptide prediction (Tat-pathway)
| ChloloP prediction of chloroplast transit peptides
| TargetP prediction of subcellular location in eukaryotic proteins
| THMHH prediction of transmembrane helices in proteins
| Annotation interface
| Calc. oligo Tm | check PCR primers
| Calc. protein MW
| Calc. codon usage
| ResView - simulation of restriction digest (genome)
| IP/Domain name Lookup
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