Last updated : 27th Jul 2009
Streptomyces avermitilis Genome
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Streptomyces avermitilis is an industrial microorganism produced anthelmintic macrolide Avermectins.
What's New
If you have any comments against the annotation, please send us them. (mailto: info@avermitilis.ls.kitasato-u.ac.jp)
The valuable comments will be feed back to the updated annotation.

About this project Browse Genome Physical map Ordering cosmid clones Secondary metabolites
BLAST / (secure) FASTA / (secure) cytochrome P450 genes Strain-specific genes Accession Numbers
Download the sequences Protein family table Conserved genes Tree (16S rRNA) oriC region
Codon Usage KEGG pathway Links Acknowledgments

General features of the genome
Linear Chromosome ver.090727
Length9,025,608 bp
G+C content70.7%
Protein-coding gene7,582
Average CDS size1,027 bp
Coding86.3%
rRNA gene (16S-23S-5S)6
tRNA gene68 (43 species)
tmRNA gene1
scRNA gene1
Sigma factor60 (47 ECF subfamily) tree

Linear Plasmid SAP1 ver.090102
Length94,287 bp
G+C content69.2%
Protein-coding gene101
Average CDS size898 bp
Coding79.0%
rRNA gene (16S-23S-5S)0
tRNA gene0
tmRNA gene0
Sigma factor1
References: Proc. Natl. Acad. Sci. USA 98:12215-12220 (2001).

Nature Biotechnology 21:526-531 (2003).supplementary information

Biochem Biophys Res Commun. 307:610-619 (2003).

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